remove getopt call in configuration module, it changes the argv order. Fix configuration module bugs (command line arguments sometimes not properly processed

fixed various bugs in NFAPI interface and DCI CCE allocations (eNB_scheduler_primitives.c:allocate_CCEs())

fixed coherency issue across slots for PUCCH 1A/B detection (energy detection component). Introduced a variable scaling for channel matched filter in PUCCH1A/B detector. Current version goes as far on simulator as RU-RAU-split prior to merge with develop

not finished, UE may not work, many things bad/to fix properly

this and some cleanup, duplicate defs in .h file

Conflicts:
	common/config/config_userapi.h
	openair2/ENB_APP/enb_config.c
	targets/RT/USER/lte-softmodem.c

Conflicts:
	openair1/PHY/INIT/lte_init.c
	openair1/PHY/LTE_ESTIMATION/defs.h
	openair1/PHY/LTE_ESTIMATION/lte_ue_measurements.c
	openair1/PHY/LTE_TRANSPORT/dci.c
	openair1/PHY/LTE_TRANSPORT/dci_tools.c
	openair1/PHY/LTE_TRANSPORT/defs.h
	openair1/PHY/LTE_TRANSPORT/dlsch_decoding.c
	openair1/PHY/LTE_TRANSPORT/dlsch_demodulation.c
	openair1/PHY/LTE_TRANSPORT/dlsch_llr_computation.c
	openair1/PHY/LTE_TRANSPORT/if5_tools.c
	openair1/PHY/LTE_TRANSPORT/phich.c
	openair1/PHY/LTE_TRANSPORT/proto.h
	openair1/PHY/defs.h
	openair1/SCHED/phy_procedures_lte_eNb.c
	openair1/SCHED/phy_procedures_lte_ue.c
	openair1/SCHED/pusch_pc.c
	openair2/ENB_APP/enb_config.c
	openair2/LAYER2/MAC/defs.h
	openair2/LAYER2/MAC/eNB_scheduler.c
	openair2/LAYER2/MAC/eNB_scheduler_dlsch.c
	openair2/LAYER2/MAC/eNB_scheduler_primitives.c
	openair2/LAYER2/MAC/eNB_scheduler_ulsch.c
	openair2/LAYER2/MAC/pre_processor.c
	openair2/LAYER2/MAC/ue_procedures.c
	targets/RT/USER/lte-enb.c
	targets/RT/USER/lte-softmodem.c
	targets/RT/USER/lte-softmodem.h
	targets/RT/USER/lte-ue.c
	targets/SIMU/USER/init_lte.c
	targets/SIMU/USER/oaisim_functions.c